Get htslib Capabilities — htslib_capabilities • RBCFTools

Returns a named list of all capabilities of the bundled htslib library.

Usage

htslib_capabilities()

Value

A named list with logical values for each capability:

configure: Whether ./configure was used to build.
plugins: Whether plugins are enabled.
libcurl: Whether libcurl support is enabled.
s3: Whether S3 support is enabled.
gcs: Whether Google Cloud Storage support is enabled.
libdeflate: Whether libdeflate compression is enabled.
lzma: Whether LZMA compression is enabled.
bzip2: Whether bzip2 compression is enabled.
htscodecs: Whether htscodecs library is available.

Examples

caps <- htslib_capabilities()
caps$libcurl
#> [1] TRUE
caps$s3
#> [1] TRUE