Check if VCF has VEP-style annotations

Check if VCF has VEP-style annotations

Usage

vep_has_annotation(filename)

Arguments

filename

Path to VCF/BCF file

Value

Logical indicating presence of CSQ, BCSQ, or ANN

Examples

if (FALSE) { # \dontrun{
if (vep_has_annotation("file.vcf.gz")) {
  schema <- vep_get_schema("file.vcf.gz")
}
} # }