A completed Rdragmap child-process operation

A completed Rdragmap child-process operation

A completed Rdragmap index build

A completed Rdragmap FASTQ alignment

Usage

RdragmapRunResult(
  operation = character(0),
  outputs = list(),
  status = integer(0),
  stdout = character(0),
  stderr = character(0)
)

RdragmapIndexBuildResult(
  operation = character(0),
  outputs = list(),
  status = integer(0),
  stdout = character(0),
  stderr = character(0),
  index = RdragmapIndex()
)

RdragmapAlignmentResult(
  operation = character(0),
  outputs = list(),
  status = integer(0),
  stdout = character(0),
  stderr = character(0),
  index = RdragmapIndex(),
  paired = logical(0)
)

Arguments

operation

Stable operation identifier.

outputs

Named output paths produced by the operation.

status

Child-process exit status.

stdout

Captured standard output.

stderr

Captured standard error.

index

The reference index used by the operation.

paired

Whether the operation received paired FASTQ input.