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Decompresses a BGZF file using the DuckHTS extension.

Usage

rduckhts_bgunzip(
  con,
  path,
  output_path = NULL,
  threads = 4,
  keep = TRUE,
  overwrite = FALSE
)

Arguments

con

A DuckDB connection with DuckHTS loaded

path

Path to the BGZF-compressed input file

output_path

Optional explicit output path

threads

BGZF worker thread count

keep

Keep the compressed input file after decompression

overwrite

Overwrite an existing output file

Value

A data frame describing the created output file